Biobase: snpCall – R documentation

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snpCall

Get and retrieve SNP call and call probability data.

These generic functions access the calls and call probabilities stored in objects.

snpCall(object, ...)
snpCall(object, ...) <- value
snpCallProbability(object, ...)
snpCallProbability(object, ...) <- value

`object`	Object, possibly derived from class `SnpSet`.
`value`	Matrix with rows representing SNP calls or call probabilities and columns samples.
`...`	Additional arguments available to methods.

snpCall returns a matrix of SNP calls; snpCallProbability returns the corresponding matrix of standard errors, when available.

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