Become an expert in R — Interactive courses, Cheat Sheets, certificates and more!
Get Started for Free

trav_both_edge

Traverse from one or more selected nodes onto adjacent edges


Description

From a graph object of class dgr_graph move to adjacent edges from a selection of one or more selected nodes, thereby creating a selection of edges. An optional filter by edge attribute can limit the set of edges traversed to.

Usage

trav_both_edge(
  graph,
  conditions = NULL,
  copy_attrs_from = NULL,
  copy_attrs_as = NULL,
  agg = "sum"
)

Arguments

graph

A graph object of class dgr_graph.

conditions

An option to use filtering conditions for the traversal.

copy_attrs_from

Providing a node attribute name will copy those node attribute values to the traversed edges. If the edge attribute already exists, the values will be merged to the traversed edges; otherwise, a new edge attribute will be created.

copy_attrs_as

If a node attribute name is provided in copy_attrs_from, this option will allow the copied attribute values to be written under a different edge attribute name. If the attribute name provided in copy_attrs_as does not exist in the graph's edf, the new edge attribute will be created with the chosen name.

agg

If a node attribute is provided to copy_attrs_from, then an aggregation function is required since there may be cases where multiple node attribute values will be passed onto the traversed edge(s). To pass only a single value, the following aggregation functions can be used: sum, min, max, mean, or median.

Details

This traversal function makes use of an active selection of nodes. After the traversal, depending on the traversal conditions, there will either be a selection of edges or no selection at all.

Selections of nodes can be performed using the following node selection (select_*()) functions: select_nodes(), select_last_nodes_created(), select_nodes_by_degree(), select_nodes_by_id(), or select_nodes_in_neighborhood().

Selections of nodes can also be performed using the following traversal (trav_*()) functions: trav_out(), trav_in(), trav_both(), trav_out_node(), trav_in_node(), trav_out_until(), or trav_in_until().

Value

A graph object of class dgr_graph.

Examples

# Set a seed
suppressWarnings(RNGversion("3.5.0"))
set.seed(23)

# Create a simple graph
graph <-
  create_graph() %>%
  add_n_nodes(
    n = 2,
    type = "a",
    label = c("asd", "iekd")) %>%
  add_n_nodes(
    n = 3,
    type = "b",
    label = c("idj", "edl", "ohd")) %>%
  add_edges_w_string(
    edges = "1->2 1->3 2->4 2->5 3->5",
    rel = c(NA, "A", "B", "C", "D"))

# Create a data frame with node ID values
# representing the graph edges (with `from`
# and `to` columns), and, a set of numeric values
df <-
  data.frame(
    from = c(1, 1, 2, 2, 3),
    to = c(2, 3, 4, 5, 5),
    values = round(rnorm(5, 5), 2))

# Join the data frame to the graph's internal
# edge data frame (edf)
graph <-
  graph %>%
  join_edge_attrs(df = df)

# Show the graph's internal edge data frame
graph %>% get_edge_df()

# Perform a simple traversal from nodes to
# adjacent edges with no conditions on the
# nodes traversed to
graph %>%
  select_nodes_by_id(nodes = 3) %>%
  trav_both_edge() %>%
  get_selection()

# Traverse from node `2` to any adjacent
# edges, filtering to those edges that have
# NA values for the `rel` edge attribute
graph %>%
  select_nodes_by_id(nodes = 2) %>%
  trav_both_edge(
    conditions = is.na(rel)) %>%
  get_selection()

# Traverse from node `2` to any adjacent
# edges, filtering to those edges that have
# numeric values greater than `6.5` for
# the `rel` edge attribute
graph %>%
  select_nodes_by_id(nodes = 2) %>%
  trav_both_edge(
    conditions = values > 6.5) %>%
  get_selection()

# Traverse from node `5` to any adjacent
# edges, filtering to those edges that
# have values equal to `C` for the `rel`
# edge attribute
graph %>%
  select_nodes_by_id(nodes = 5) %>%
  trav_both_edge(
    conditions = rel == "C") %>%
  get_selection()

# Traverse from node `2` to any adjacent
# edges, filtering to those edges that
# have values in the set `B` and `C` for
# the `rel` edge attribute
graph %>%
  select_nodes_by_id(nodes = 2) %>%
  trav_both_edge(
    conditions = rel %in% c("B", "C")) %>%
  get_selection()

# Traverse from node `2` to any adjacent
# edges, and use multiple conditions for the
# traversal
graph %>%
  select_nodes_by_id(nodes = 2) %>%
  trav_both_edge(
    conditions =
      rel %in% c("B", "C") &
      values > 4.0) %>%
  get_selection()

# Traverse from node `2` to any adjacent
# edges, and use multiple conditions with
# a single-length vector
graph %>%
  select_nodes_by_id(nodes = 2) %>%
  trav_both_edge(
    conditions =
      rel %in% c("B", "C") |
      values > 4.0) %>%
  get_selection()

# Traverse from node `2` to any adjacent
# edges, and use a regular expression as
# a filtering condition
graph %>%
  select_nodes_by_id(nodes = 2) %>%
  trav_both_edge(
    conditions = grepl("B|C", rel)) %>%
  get_selection()

# Create another simple graph to demonstrate
# copying of node attribute values to traversed
# edges
graph <-
  create_graph() %>%
  add_path(n = 4) %>%
  select_nodes_by_id(nodes = 2:3) %>%
  set_node_attrs_ws(
    node_attr = value,
    value = 5)

# Show the graph's internal edge data frame
graph %>%get_edge_df()

# Show the graph's internal node data frame
graph %>% get_node_df()

# Perform a traversal from the nodes to
# the adjacent edges while also applying
# the node attribute `value` to the edges (in
# this case summing the `value` of 5 from
# all contributing nodes adding as an edge
# attribute)
graph <-
  graph %>%
  trav_both_edge(
    copy_attrs_from = value,
    agg = "sum")

# Show the graph's internal edge data frame
# after this change
graph %>% get_edge_df()

DiagrammeR

Graph/Network Visualization

v1.0.6.1
MIT + file LICENSE
Authors
Richard Iannone [aut, cre] (<https://orcid.org/0000-0003-3925-190X>)
Initial release

We don't support your browser anymore

Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.