KernSmooth: bkde2D – R documentation

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bkde2D

Compute a 2D Binned Kernel Density Estimate

Description

Returns the set of grid points in each coordinate direction, and the matrix of density estimates over the mesh induced by the grid points. The kernel is the standard bivariate normal density.

Usage

bkde2D(x, bandwidth, gridsize = c(51L, 51L), range.x, truncate = TRUE)

Arguments

`x`	a two-column numeric matrix containing the observations from the distribution whose density is to be estimated. Missing values are not allowed.
`bandwidth`	numeric vector oflength 2, containing the bandwidth to be used in each coordinate direction.
`gridsize`	vector containing the number of equally spaced points in each direction over which the density is to be estimated.
`range.x`	a list containing two vectors, where each vector contains the minimum and maximum values of `x` at which to compute the estimate for each direction. The default minimum in each direction is minimum data value minus 1.5 times the bandwidth for that direction. The default maximum is the maximum data value plus 1.5 times the bandwidth for that direction
`truncate`	logical flag: if TRUE, data with `x` values outside the range specified by `range.x` are ignored.

Value

a list containing the following components:

`x1`	vector of values of the grid points in the first coordinate direction at which the estimate was computed.
`x2`	vector of values of the grid points in the second coordinate direction at which the estimate was computed.
`fhat`	matrix of density estimates over the mesh induced by `x1` and `x2`.

Details

This is the binned approximation to the 2D kernel density estimate. Linear binning is used to obtain the bin counts and the Fast Fourier Transform is used to perform the discrete convolutions. For each x1,x2 pair the bivariate Gaussian kernel is centered on that location and the heights of the kernel, scaled by the bandwidths, at each datapoint are summed. This sum, after a normalization, is the corresponding fhat value in the output.

References

Wand, M. P. (1994). Fast Computation of Multivariate Kernel Estimators. Journal of Computational and Graphical Statistics, 3, 433-445.

Wand, M. P. and Jones, M. C. (1995). Kernel Smoothing. Chapman and Hall, London.

Examples

data(geyser, package="MASS")
x <- cbind(geyser$duration, geyser$waiting)
est <- bkde2D(x, bandwidth=c(0.7, 7))
contour(est$x1, est$x2, est$fhat)
persp(est$fhat)

KernSmooth

Functions for Kernel Smoothing Supporting Wand & Jones (1995)

v2.23-20

Unlimited

Authors

Matt Wand [aut], Cleve Moler [ctb] (LINPACK routines in src/d*), Brian Ripley [trl, cre, ctb] (R port and updates)

Initial release

2021-05-03