Cluster Matrix Rows in Annotated Heatmaps
Cluster Matrix Rows in Annotated Heatmaps
cluster_mat(mat, param, distfun, hclustfun, reorderfun,
na.rm = TRUE, subset = NULL, verbose = FALSE)mat |
original input matrix that has already been
appropriately subset in the caller function
( |
param |
clustering specifications |
distfun |
Default distance method/function |
hclustfun |
Default clustering (linkage) method/function |
reorderfun |
Default reordering function |
na.rm |
Logical that specifies if NA values should be removed |
subset |
index (integer) vector specifying the subset indexes used to subset mat. This is required to be able to return the original indexes. |
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