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RNiftyReg

Image Registration Using the 'NiftyReg' Library

Provides an 'R' interface to the 'NiftyReg' image registration tools <https://github.com/KCL-BMEIS/niftyreg>. Linear and nonlinear registration are supported, in two and three dimensions.

Functions (21)

affine

Create, test for and print affine matrices

applyTransform

Apply a precomputed transformation

buildAffine

Build an affine matrix up from its constituent transformations

composeTransforms

Compose transformations

decomposeAffine

Decompose an affine matrix into its constituent transformations

deformationField

Calculate the deformation field for a transformation

forward

Extract forward and reverse transformations

halfTransform

Calculate a half transformation

invertAffine

Invert an affine matrix

isImage

Test whether an object represents an image

jacobian

Extract a Jacobian determinant map

niftyreg

Two and three dimensional image registration

niftyreg.linear

Two and three dimensional linear image registration

niftyreg.nonlinear

Two and three dimensional nonlinear image registration

readAffine

Read an affine matrix from a file

readNifti

Read a NIfTI-1 format file

reexports

Objects exported from other packages

saveTransform

Save and load transform objects

similarity

Similarity measures between images

translate

Apply simple transformations

writeAffine

Write an affine matrix to a file

RNiftyReg

Image Registration Using the 'NiftyReg' Library

v2.7.0

GPL-2

Authors

Jon Clayden [cre, aut] (<https://orcid.org/0000-0002-6608-0619>), Marc Modat [aut], Benoit Presles [aut], Thanasis Anthopoulos [aut], Pankaj Daga [aut]

Initial release

2020-09-10

RNiftyReg

Functions (21)

RNiftyReg

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