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hubGeneSignificance

Hubgene significance


Description

Calculate approximate hub gene significance for all modules in network.

Usage

hubGeneSignificance(datKME, GS)

Arguments

datKME

a data frame (or a matrix-like object) containing eigengene-based connectivities of all genes in the network.

GS

a vector with one entry for every gene containing its gene significance.

Details

In datKME rows correspond to genes and columns to modules.

Value

A vector whose entries are the hub gene significances for each module.

Author(s)

Steve Horvath

References

Dong J, Horvath S (2007) Understanding Network Concepts in Modules, BMC Systems Biology 2007, 1:24


WGCNA

Weighted Correlation Network Analysis

v1.70-3
GPL (>= 2)
Authors
Peter Langfelder <Peter.Langfelder@gmail.com> and Steve Horvath <SHorvath@mednet.ucla.edu> with contributions by Chaochao Cai, Jun Dong, Jeremy Miller, Lin Song, Andy Yip, and Bin Zhang
Initial release
2021-02-17

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