WGCNA: keepCommonProbes – R documentation

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keepCommonProbes

Keep probes that are shared among given data sets

This function strips out probes that are not shared by all given data sets, and orders the remaining common probes using the same order in all sets.

keepCommonProbes(multiExpr, orderBy = 1)

`multiExpr`	expression data in the multi-set format (see `checkSets`). A vector of lists, one per set. Each set must contain a component `data` that contains the expression data, with rows corresponding to samples and columns to genes or probes.
`orderBy`	index of the set by which probes are to be ordered.

Expression data in the same format as the input data, containing only common probes.

Peter Langfelder