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ruzicka

Ruzicka or weighted Jaccard distance


Description

Ruzicka or weighted Jaccard distance

Usage

ruzicka(x, y)

Arguments

x, y

Numeric vectors.

Details

For vectors x and y, the Ruzicka distance is defined as

d(x, y) = 1 - \frac{∑_i \min(x, y)}{∑_i \max(x, y)}.

Relation to other definitions:

  • Equivalent to vegdist() with method = "jaccard".

  • Related to the Bray-Curtis distance, d_r = 2 d_{bc} / (1 + d_{bc}).

Value

The Ruzicka distance between x and y. The distance is not defined if all elements in x and y are zero, and we return NaN in this case.


abdiv

Alpha and Beta Diversity Measures

v0.2.0
MIT + file LICENSE
Authors
Kyle Bittinger [aut, cre]
Initial release

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