Generate an expression value from the probes informations
Generate an expression from the probes
generateExprVal.method.playerout(probes, weights=FALSE, optim.method="L-BFGS-B")
probes |
a list of |
weights |
Should the resulting weights be returned ? |
optim.method |
see parameter 'optim' for the function |
A non-parametric method to weight each perfect match probe in the set and
to compute a weighted mean of the perfect match values. One will notice
this method only makes use of the perfect matches. (see function
playerout.costfunction for the cost function).
A vector of expression values.
Laurent <laurent@cbs.dtu.dk>
(Thanks to E. Lazaridris for the original playerout code and the
discussions about it)
Emmanuel N. Lazaridis, Dominic Sinibaldi, Gregory Bloom, Shrikant Mane and Richard Jove A simple method to improve probe set estimates from oligonucleotide arrays, Mathematical Biosciences, Volume 176, Issue 1, March 2002, Pages 53-58
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