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R
affy

plot.ProbeSet

plot a probe set

Description

Plot intensities by probe set.

Usage

## S3 method for class 'ProbeSet'
plot(x, which=c("pm", "mm"), xlab = "probes", type = "l", ylim = NULL, ...)

Arguments

x

a ProbeSet object.
which

get the PM or the MM.
xlab

x-axis label.
type

plot type.
ylim

range of the y-axis.
...

optional arguments to be passed to matplot.

Value

This function is only used for its (graphical) side-effect.

See Also

Examples

data(SpikeIn)
plot(SpikeIn)
affy

Methods for Affymetrix Oligonucleotide Arrays

v1.68.0
LGPL (>= 2.0)
Authors
Rafael A. Irizarry <rafa@ds.harvard.edu>, Laurent Gautier <lgautier@gmail.com>, Benjamin Milo Bolstad <bmb@bmbolstad.com>, and Crispin Miller <cmiller@picr.man.ac.uk> with contributions from Magnus Astrand <Magnus.Astrand@astrazeneca.com>, Leslie M. Cope <cope@mts.jhu.edu>, Robert Gentleman, Jeff Gentry, Conrad Halling <challing@agilixcorp.com>, Wolfgang Huber, James MacDonald <jmacdon@u.washington.edu>, Benjamin I. P. Rubinstein, Christopher Workman <workman@cbs.dtu.dk>, John Zhang
Initial release

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