aod: summary.glimML-class – R documentation

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aod

summary.glimML-class

Summary of Objects of Class "summary.glimML"

Description

Summary of a model of formal class “glimML” fitted by betabin or negbin.

Objects from the Class

Objects can be created by calls of the form new("summary.glimML", ...) or, more commonly, via the summary or show method for objects of formal class “glimML”.

Slots

object: An object of formal class “glimML”.
Coef: A data frame containing the estimates, standard error, z and P values for the fixed-effect coefficients which were estimated by the fitting function.
FixedCoef: A data frame containing the values of the fixed-effect coefficients which were set to a fixed value.
Phi: A data frame containing the estimates, standard error, z and P values for the overdispersion coefficients which were estimated by the fitting function. Because the overdispersion coefficients are > 0, P values correspond to unilateral tests.
FixedPhi: A data frame containing the values of the overdispersion coefficients which were set to a fixed value.

Methods

show: signature(object = "summary.glimML")
show: signature(object = "glimML")
summary: signature(object = "glimML")

Examples

data(orob2)
  fm1 <- betabin(cbind(y, n - y) ~ seed, ~ 1, data = orob2)
  # show objects of class "glimML"
  fm1
  # summary for objects of class "glimML"
  res <- summary(fm1)
  res@Coef
  # show objects of class "summary.glimML"
  res

aod

Analysis of Overdispersed Data

v1.3.1

GPL (>= 2)

Authors

Matthieu Lesnoff <matthieu.lesnoff@cirad.fr> and Renaud Lancelot <renaud.lancelot@cirad.fr>

Initial release

2012-04-10