binGroup: gt.control – R documentation

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gt.control

Auxiliary for Controlling Group Testing Regression

Auxiliary function to control fitting parameters of EM algorithm used internally in gtreg.mp and EM.mp or gtreg, EM, and EM.ret.

gt.control(tol = 0.0001, n.gibbs = 1000, n.burnin = 20,
 maxit = 500, trace = FALSE, time = TRUE)

`tol`	convergence criterion
`n.gibbs`	the Gibbs sample size to be used in each E step for the EM algorithm (default is 1000), for matrix pooling
`n.burnin`	the number of samples in the burn-in period (default is 20), for matrix pooling
`maxit`	maximal number of iterations in the EM algorithm
`trace`	logical indicating if output should be printed for each iteration, defaults to `FALSE`
`time`	logical indicating if the length of time for the model fitting should be printed, defaults to `TRUE`

A list with components named as the arguments

# The default settings:
gt.control()

Evaluation and Experimental Design for Binomial Group Testing

v2.2-1

GPL (>= 3)

Authors

Boan Zhang [aut], Christopher Bilder [aut], Brad Biggerstaff [aut], Frank Schaarschmidt [aut, cre], Brianna Hitt [aut]

Initial release

2018-08-24