Exports getSequence results to FASTA format
Exports getSequence results to FASTA format
exportFASTA(sequences, file)
sequences |
A data.frame that was the output of the getSequence function |
file |
File to which you want to write the data |
Steffen Durinck
if(interactive()){ mart <- useMart("ensembl", dataset="hsapiens_gene_ensembl") #seq<-getSequence(chromosome=c(2,2),start=c(100000,30000),end=c(100300,30500),mart=mart) #exportFASTA(seq,file="test.fasta") martDisconnect(mart = mart) }
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