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useDataset

Select a dataset to use and updates Mart object


Description

This function selects a dataset and updates the Mart object

Usage

useDataset(dataset,mart, verbose = FALSE)

Arguments

dataset

Dataset you want to use. List of possible datasets can be retrieved using the function listDatasets

mart

Mart object created with the useMart function

verbose

Give detailed output of what the method is doing, for debugging

Author(s)

Steffen Durinck

Examples

if(interactive()){
mart=useMart("ensembl")
mart=useDataset("hsapiens_gene_ensembl", mart = mart)
}

biomaRt

Interface to BioMart databases (i.e. Ensembl)

v2.46.3
Artistic-2.0
Authors
Steffen Durinck [aut], Wolfgang Huber [aut], Sean Davis [ctb], Francois Pepin [ctb], Vince S Buffalo [ctb], Mike Smith [ctb, cre] (<https://orcid.org/0000-0002-7800-3848>)
Initial release

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