Draw polygon
Draw polygon
circos.polygon( x, y, sector.index = get.current.sector.index(), track.index = get.current.track.index(), ...)
x |
Data points on x-axis |
y |
Data points on y-axis |
sector.index |
Index for the sector |
track.index |
Index for the track |
... |
pass to |
similar as polygon
.
Note: start point should overlap with the end point.
set.seed(123) sectors = letters[1:4] circos.initialize(sectors, xlim = c(0, 1)) circos.trackPlotRegion(ylim = c(-3, 3), track.height = 0.4, panel.fun = function(x, y) { x1 = runif(20) y1 = x1 + rnorm(20) or = order(x1) x1 = x1[or] y1 = y1[or] loess.fit = loess(y1 ~ x1) loess.predict = predict(loess.fit, x1, se = TRUE) d1 = c(x1, rev(x1)) d2 = c(loess.predict$fit + loess.predict$se.fit, rev(loess.predict$fit - loess.predict$se.fit)) circos.polygon(d1, d2, col = "#CCCCCC", border = NA) circos.points(x1, y1, cex = 0.5) circos.lines(x1, loess.predict$fit) }) circos.clear()
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