Draw y-axis
Draw y-axis
circos.yaxis(
side = c("left", "right"),
at = NULL,
labels = TRUE,
tick = TRUE,
sector.index = get.current.sector.index(),
track.index = get.current.track.index(),
labels.font = par("font"),
labels.cex = par("cex"),
labels.niceFacing = TRUE,
tick.length = convert_x(1, "mm", sector.index, track.index),
lwd = par("lwd"),
col = par("col"),
labels.col = par("col"))side |
add the y-axis on the left or right of the cell |
at |
If it is numeric vector, it identifies the positions of the ticks. It can exceed |
labels |
labels of the ticks. The exceeding part would be trimmed automatically. The value can also be logical (either an atomic value or a vector) which represents which labels to show. |
tick |
Whether to draw ticks. |
sector.index |
Index for the sector |
track.index |
Index for the track |
labels.font |
font style for the axis labels |
labels.cex |
font size for the axis labels |
labels.niceFacing |
Should facing of axis labels be human-easy |
tick.length |
length of the tick |
lwd |
line width for ticks |
col |
color for the axes |
labels.col |
color for the labels |
Note, you need to set the gap between sectors manually by circos.par to make sure there is enough space
for y-axis.
op = par(no.readonly = TRUE)
sectors = letters[1:8]
circos.par(points.overflow.warning = FALSE)
circos.par(gap.degree = 8)
circos.initialize(sectors, xlim = c(0, 10))
circos.trackPlotRegion(sectors, ylim = c(0, 10), track.height = 0.5)
par(cex = 0.8)
for(a in letters[2:4]) {
circos.yaxis(side = "left", sector.index = a)
}
for(a in letters[5:7]) {
circos.yaxis(side = "right", sector.index = a)
}
circos.clear()
par(op)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.