coloc: eta – R documentation

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eta

Methods to extract information from a coloc or colocBayes object

Extract information from a coloc object.

eta(object)

object

Object returned by coloc.test() or coloc.bma() functions.

eta() returns eta.hat, the maximum likelihood value of eta.

theta() returns theta.hat, the maximum likelihood value of eta.

summary() returns a summary, giving eta, chisquare statistic, number of SNPs/PCs, p value and, if a colocBayes object, the ppp.value

ci() returns the credible interval, or NA if not calculated.

Chris Wallace.