Example data set as text file to be imported into a genlight object
Check ?read.genetable in pacakge PopGenReport for details on the format.
csv
Bernd Gruber (bugs? Post to https://groups.google.com/d/forum/dartr
library(PopGenReport) read.csv( paste(.libPaths()[1],"/dartR/extdata/platy.csv",sep="" )) platy <- read.genetable( paste(.libPaths()[1],"/dartR/extdata/platy.csv", sep="" ), ind=1, pop=2, lat=3, long=4, other.min=5, other.max=6, oneColPerAll=FALSE, sep="/") platy.gl <- gi2gl(platy, parallel=FALSE) df.loc <- data.frame(RepAvg = runif(nLoc(platy.gl)), CallRate = 1) platy.gl@other$loc.metrics <- df.loc gl.report.reproducibility(platy.gl)
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