Method cophenetic_correlation
Calculate the correlation between the distance matrices in high and low dimensioal space.
## S4 method for signature 'dimRedResult' cophenetic_correlation(object, d = stats::dist, cor_method = "pearson")
object |
of class dimRedResult |
d |
the distance function to use. |
cor_method |
The correlation method. |
Other Quality scores for dimensionality reduction: AUC_lnK_R_NX,dimRedResult-method,
LCMC,dimRedResult-method,
Q_NX,dimRedResult-method,
Q_global,dimRedResult-method,
Q_local,dimRedResult-method,
R_NX,dimRedResult-method,
distance_correlation,dimRedResult-method,
mean_R_NX,dimRedResult-method,
plot_R_NX,
quality,dimRedResult-method,
reconstruction_error,dimRedResult-method,
reconstruction_rmse,dimRedResult-method,
total_correlation,dimRedResult-method
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