Contains a number of comparative 'phylogenetic' methods,
mostly focusing on analysing diversification and character
evolution.  Contains implementations of 'BiSSE' (Binary State
'Speciation' and Extinction) and its unresolved tree extensions,
'MuSSE' (Multiple State 'Speciation' and Extinction), 'QuaSSE',
'GeoSSE', and 'BiSSE-ness' Other included methods include Markov
models of discrete and continuous trait evolution and constant rate
'speciation' and extinction.

Comparative 'Phylogenetic' Analyses of Diversification

package-ubuntu-20.04-r-4.0.5#cran#diversitree-0.9-15

<p>These constants are used by <code><a href="make.bisse.html">make.bisse</a></code>, 
<code><a href="make.geosse.html">make.geosse</a></code> and <code><a href="make.mkn.html">make.mkn</a></code>
for specifying root behaviour.
</p>

ROOT.FLAT
ROOT.EQUI
ROOT.OBS
ROOT.GIVEN
ROOT.BOTH
ROOT.ALL
ROOT.MAX

package-ubuntu-20.04-r-4.0.5#cran#diversitree-0.9-15#docs#constants

constants

Description

Usage

diversitree

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