Deprecated functionality
All functions, methods and classes listed on this page are deprecated and might be removed in future releases.
GeneidFilter
creates a GeneIdFilter
. Use
GeneIdFilter
from the AnnotationFilter
package instead.
GenebiotypeFilter
creates a GeneBiotypeFilter
. Use
GeneBiotypeFilter
from the AnnotationFilter
package instead.
EntrezidFilter
creates a EntrezFilter
. Use
EntrezFilter
from the AnnotationFilter
package instead.
TxidFilter
creates a TxIdFilter
. Use
TxIdFilter
from the AnnotationFilter
package instead.
TxbiotypeFilter
creates a TxBiotypeFilter
. Use
TxBiotypeFilter
from the AnnotationFilter
package instead.
ExonidFilter
creates a ExonIdFilter
. Use
ExonIdFilter
from the AnnotationFilter
package instead.
ExonrankFilter
creates a ExonRankFilter
. Use
ExonRankFilter
from the AnnotationFilter
package instead.
SeqNameFilter
creates a SeqNameFilter
. Use
SeqNameFilter
from the AnnotationFilter
package instead.
SeqstrandFilter
creates a SeqStrandFilter
. Use
SeqStrandFilter
from the AnnotationFilter
instead.
SeqstartFilter
creates a GeneStartFilter
, TxStartFilter
or ExonStartFilter
depending on the value of the parameter
feature
. Use GeneStartFilter
, TxStartFilter
and
ExonStartFilter
instead.
SeqendFilter
creates a GeneEndFilter
, TxEndFilter
or ExonEndFilter
depending on the value of the parameter
feature
. Use GeneEndFilter
, TxEndFilter
and
ExonEndFilter
instead.
GeneidFilter(value, condition = "==") GenebiotypeFilter(value, condition = "==") EntrezidFilter(value, condition = "==") TxidFilter(value, condition = "==") TxbiotypeFilter(value, condition = "==") ExonidFilter(value, condition = "==") ExonrankFilter(value, condition = "==") SeqnameFilter(value, condition = "==") SeqstrandFilter(value, condition = "==") SeqstartFilter(value, condition = ">", feature = "gene") SeqendFilter(value, condition = "<", feature = "gene")
value |
The value for the filter. |
condition |
The condition for the filter. |
feature |
For |
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