ggsci: pal_locuszoom – R documentation

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pal_locuszoom

LocusZoom Color Palette

Color palettes based on the colors used by LocusZoom.

pal_locuszoom(palette = c("default"), alpha = 1)

`palette`	Palette type. Currently there is one available option: `"default"` (7-color palette).
`alpha`	Transparency level, a real number in (0, 1]. See `alpha` in `rgb` for details.

Pruim, Randall J., et al. (2010). LocusZoom: regional visualization of genome-wide association scan results. Bioinformatics, 26(18), 2336–2337.

library("scales")
show_col(pal_locuszoom("default")(7))
show_col(pal_locuszoom("default", alpha = 0.6)(7))

Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'

v2.9

GPL-3 | file LICENSE

Authors

Nan Xiao [aut, cre] (<https://orcid.org/0000-0002-0250-5673>), Miaozhu Li [ctb]

Initial release