Become an expert in R — Interactive courses, Cheat Sheets, certificates and more!
Get Started for Free

TajimaD.dosage

Estimates Tajima's D

Description

Estimates Tajima's D from dosage data

Usage

TajimaD.dosage(dos)

Arguments

dos

a ni X nl dosage matrix containing the number of derived/alternate alleles each individual carries at each SNP

Value

Tajima's D (eqn 38 of Tajima, 1989)

References

Tajima F. 1989 Statistical Method for Testing the Neutral Mutation Hypothesis by DNA Polymorphism. Genetics 123:585-595.

hierfstat

Estimation and Tests of Hierarchical F-Statistics

v0.5-10
GPL (>= 2)
Authors
Jerome Goudet [aut, cre], Thibaut Jombart [aut], Zhian N. Kamvar [ctb], Eric Archer [ctb], Olivier Hardy [ctb]
Initial release
2021-11-16

We don't support your browser anymore

Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.