hierfstat: nb.alleles – R documentation

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nb.alleles

Number of different alleles

Counts the number of different alleles at each locus and population

nb.alleles(data,diploid=TRUE)

`data`	A data frame containing the population of origin in the first column and the genotypes in the following ones
`diploid`	whether individuals are diploid

A table, –with np (number of populations) columns and nl (number of loci) rows– of the number of different alleles

data(gtrunchier)
nb.alleles(gtrunchier[,-2])

Estimation and Tests of Hierarchical F-Statistics

v0.5-10

GPL (>= 2)

Authors

Jerome Goudet [aut, cre], Thibaut Jombart [aut], Zhian N. Kamvar [ctb], Eric Archer [ctb], Olivier Hardy [ctb]

Initial release

2021-11-16