jagsUI: traceplot – R documentation

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traceplot

Traceplots of JAGS output

Description

Displays a series of MCMC iteration plots for each monitored parameter in a JAGS analysis. The calculated Rhat value for each parameter is given in the plot title if there is >1 chains.

Usage

traceplot(x, ...)

  ## S3 method for class 'jagsUI'
traceplot(x, parameters=NULL, ...)

Arguments

`x`	A jagsUI object
`parameters`	A vector of names (as characters) of parameters to plot. Parameter names must match parameters included in the model. Non-scalar parameters with multiple values (e.g. `alpha` where `alpha` is a vector of length 5) can be selected/subsetted (e.g. `alpha[1:3]`). Calling non-scalar parameters without subsetting (e.g. `alpha`) will plot all values of `alpha`. If `parameters=NULL`, all nodes will be plotted.
`...`	Further arguments pass to or from other methods.

Author(s)

Ken Kellner contact@kenkellner.com.

jagsUI

A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses

v1.5.1

GPL-3

Authors

Ken Kellner <contact@kenkellner.com>

Initial release

2019-07-30