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jomo

Multilevel Joint Modelling Multiple Imputation

Similarly to Schafer's package 'pan', 'jomo' is a package for multilevel joint modelling multiple imputation (Carpenter and Kenward, 2013) <doi: 10.1002/9781119942283>. Novel aspects of 'jomo' are the possibility of handling binary and categorical data through latent normal variables, the option to use cluster-specific covariance matrices and to impute compatibly with the substantive model.

Functions (52)

ExamScores

Exam results for six inner London Education Authorities

JSPmiss

Exam results for six inner London Education Authorities

cldata

A simulated clustered dataset

jomo

Joint Modelling Imputation

jomo.MCMCchain

JM Imputation - A tool to check convergence of the MCMC

jomo.clmm

Joint Modelling Imputation Compatible with Cumulative Link Mixed Model

jomo.clmm.MCMCchain

clmm Compatible JM Imputation - A tool to check convergence of the MCMC

jomo.coxph

Joint Modelling Imputation Compatible with Cox Proportional Hazards Model

jomo.coxph.MCMCchain

coxph Compatible JM Imputation - A tool to check convergence of the MCMC

jomo.glm

Joint Modelling Imputation Compatible with glm Model

jomo.glm.MCMCchain

glm Compatible JM Imputation - A tool to check convergence of the MCMC

jomo.glmer

Joint Modelling Imputation Compatible with Generalized Linear Mixed Model

jomo.glmer.MCMCchain

glmer Compatible JM Imputation - A tool to check convergence of the MCMC

jomo.lm

Joint Modelling Imputation Compatible with Linear Regression Model

jomo.lm.MCMCchain

lm Compatible JM Imputation - A tool to check convergence of the MCMC

jomo.lmer

Joint Modelling Imputation Compatible with Linear Mixed-effects Regression Model

jomo.lmer.MCMCchain

lmer Compatible JM Imputation - A tool to check convergence of the MCMC

jomo.polr

Joint Modelling Imputation Compatible with Proportional Odds Ordinal Probit Regression

jomo.polr.MCMCchain

polr Compatible JM Imputation - A tool to check convergence of the MCMC

jomo.smc

Joint Modelling Substantive Model Compatible Imputation

jomo.smc.MCMCchain

Substantive Model Compatible JM Imputation - A tool to check convergence of the MCMC

jomo1

JM Imputation of single level data

jomo1.MCMCchain

JM Imputation of single level data - A tool to check convergence of the MCMC

jomo1cat

JM Imputation of single level data with categorical variables

jomo1cat.MCMCchain

JM Imputation of single level data with categorical variables - A tool to check convergence of the MCMC

jomo1con

JM Imputation of single level data with continuous variables only

jomo1con.MCMCchain

JM Imputation of single level data with continuous variables only - A tool to check convergence of the MCMC

jomo1mix

JM Imputation of single level data with mixed variable types

jomo1mix.MCMCchain

JM Imputation of single level data with mixed variable types

jomo1ran

JM Imputation of clustered data

jomo1ran.MCMCchain

JM Imputation of clustered data - A tool to check convergence of the MCMC

jomo1rancat

JM Imputation of clustered data with categorical variables

jomo1rancat.MCMCchain

JM Imputation of clustered data with categorical variables - A tool to check convergence of the MCMC

jomo1rancathr

JM Imputation of clustered data with categorical variables with cluster-specific covariance matrices

jomo1rancathr.MCMCchain

JM Imputation of clustered data with categorical variables with cluster-specific covariance matrices - A tool to check convergence of the MCMC

jomo1rancon

JM Imputation of clustered data with continuous variables only

jomo1rancon.MCMCchain

JM Imputation of clustered data with continuous variables only - A tool to check convergence of the MCMC

jomo1ranconhr

JM Imputation of clustered data with continuous variables only with cluster-specific covariance matrices

jomo1ranconhr.MCMCchain

JM Imputation of clustered data with continuous variables only with cluster-specific covariance matrices - A tool to check convergence of the MCMC

jomo1ranmix

JM Imputation of clustered data with mixed variable types

jomo1ranmix.MCMCchain

JM Imputation of clustered data with mixed variable types - A tool to check convergence of the MCMC

jomo1ranmixhr

JM Imputation of clustered data with mixed variable types with cluster-specific covariance matrices

jomo1ranmixhr.MCMCchain

JM Imputation of clustered data with mixed variable types with cluster-specific covariance matrices - A tool to check convergence of the MCMC

jomo2

JM Imputation of 2-level data

jomo2.MCMCchain

JM Imputation of 2-level data - A tool to check convergence of the MCMC

jomo2com

JM Imputation of 2-level data assuming a common level-1 covariance matrix across level-2 units.

jomo2com.MCMCchain

JM Imputation of 2-level data assuming a common level-1 covariance matrix across level-2 units - A tool to check convergence of the MCMC

jomo2hr

JM Imputation of 2-level data assuming cluster-specific level-1 covariance matrices across level-2 unit

jomo2hr.MCMCchain

JM Imputation of 2-level data assuming cluster-specific level-1 covariance matrices across level-2 units- A tool to check convergence of the MCMC

sldata

A simulated single level dataset

surdata

A simulated dataset with survival data

tldata

A simulated 2-level dataset

jomo

Multilevel Joint Modelling Multiple Imputation

v2.7-2
GPL-2
Authors
Matteo Quartagno, James Carpenter
Initial release
2020-08-12

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