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hsct

Haematopoietic stem cell transplant


Description

This data set contains the haematopoietic stem cell transplant (HSCT) measurements obtained by a flow cytometer from mouse subjects. A flow cytometer measures the spectra of fluorescent signals from biological cell samples to study their properties.

Usage

data(hsct)

Format

A matrix with 39128 rows and 6 columns. The first column is the FITC-CD45.1 fluorescence (0-1023), the second is the PE-Ly65/Mac1 fluorescence (0-1023), the third is the PI-LiveDead fluorescence (0-1023), the fourth is the APC-CD45.2 fluorescence (0-1023), the fifth is the class label of the cell type (1, 2, 3, 4, 5), the sixth the mouse subject number (5, 6, 9, 12).

Source

Aghaeepour, N., Finak, G., The FlowCAP Consortium, The DREAM Consortium, Hoos, H., Mosmann, T. R., Brinkman, R., Gottardo, R. & Scheuermann, R. H. (2013) Critical assessment of automated flow cytometry data analysis techniques, Nature Methods 10, 228-238.


ks

Kernel Smoothing

v1.12.0
GPL-2 | GPL-3
Authors
Tarn Duong [aut, cre], Matt Wand [ctb], Jose Chacon [ctb], Artur Gramacki [ctb]
Initial release
2021-02-06

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