Arabidopsis clipping/fertilization data
Data on genetic variation in responses to fertilization and simulated herbivory in Arabidopsis
data("Arabidopsis")
A data frame with 625 observations on the following 8 variables.
reg
region: a factor with 3 levels NL
(Netherlands), SP
(Spain), SW
(Sweden)
popu
population: a factor with the form n.R
representing a population in region R
gen
genotype: a factor with 24 (numeric-valued) levels
rack
a nuisance factor with 2 levels, one for each of two greenhouse racks
nutrient
fertilization treatment/nutrient level (1, minimal nutrients or 8, added nutrients)
amd
simulated herbivory or "clipping" (apical meristem
damage): unclipped
(baseline) or clipped
status
a nuisance factor for germination method
(Normal
, Petri.Plate
, or Transplant
)
total.fruits
total fruit set per plant (integer)
From Josh Banta
Joshua A. Banta, Martin H. H Stevens, and Massimo Pigliucci (2010) A comprehensive test of the 'limiting resources' framework applied to plant tolerance to apical meristem damage. Oikos 119(2), 359–369; http://dx.doi.org/10.1111/j.1600-0706.2009.17726.x
data(Arabidopsis) summary(Arabidopsis[,"total.fruits"]) table(gsub("[0-9].","",levels(Arabidopsis[,"popu"]))) library(lattice) stripplot(log(total.fruits+1) ~ amd|nutrient, data = Arabidopsis, groups = gen, strip=strip.custom(strip.names=c(TRUE,TRUE)), type=c('p','a'), ## points and panel-average value -- ## see ?panel.xyplot scales=list(x=list(rot=90)), main="Panel: nutrient, Color: genotype")
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