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dataset

The dataset in the microeco package


Description

The dataset is structured with microtable class for the demonstration of examples and tutorials.

Usage

data(dataset)

Format

An R6 class object

Details

  • sample_table: sample information table

  • otu_table: species-community abundance table

  • tax_table: taxonomic table

  • phylo_tree: phylogenetic tree

  • taxa_abund: taxa abundance list with several tables for Phylum...Genus

  • alpha_diversity: alpha diversity table

  • beta_diversity: list with several beta diversity distance matrix


microeco

Microbial Community Ecology Data Analysis

v0.10.0
GPL-3
Authors
Chi Liu [aut, cre], Felipe R. P. Mansoldo [ctb], Umer Zeeshan Ijaz [ctb], Chenhao Li [ctb], Yang Cao [ctb], Minjie Yao [ctb], Xiangzhen Li [ctb]
Initial release

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