morse: plot.LCx – R documentation

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plot.LCx

Plotting method for LCx objects

Description

This is the generic plot S3 method for the \codeLCx class. It plots the survival probability as a function of concentration.

Usage

## S3 method for class 'LCx'
plot(
  x,
  xlab = "Concentration",
  ylab = "Survival probability \n median and 95 CI",
  main = NULL,
  subtitle = NULL,
  ...
)

Arguments

`x`	An object of class `LCx`.
`xlab`	A label for the X-axis, by default `Concentration`.
`ylab`	A label for the Y-axis, by default `Survival probability median and 95 CI`.
`main`	A main title for the plot.
`subtitle`	A subtitle for the plot
`...`	Further arguments to be passed to generic methods.

Examples

# (1) Load the data
data("propiconazole")

# (2) Create an object of class 'survData'
dataset <- survData(propiconazole)

## Not run: 
# (3) Run the survFit function with model_type SD (or IT)
out_SD <- survFit(dataset, model_type = "SD")

# (4) estimate LC50 at time 4
LCx_SD <- LCx(out_SD, X = 50, time_LCx = 4)

# (5) plot the object of class 'LCx'
plot(LCx_SD)

## End(Not run)

morse

Modelling Tools for Reproduction and Survival Data in Ecotoxicology

v3.3.1

GPL (>= 2)

Authors

Virgile Baudrot [aut], Sandrine Charles [aut], Marie Laure Delignette-Muller [aut], Wandrille Duchemin [ctb], Benoit Goussen [ctb], Nils Kehrein [ctb], Guillaume Kon-Kam-King [ctb], Christelle Lopes [ctb], Philippe Ruiz [aut], Alexander Singer [ctb], Philippe Veber [aut]

Initial release