A function giving a table of true versus predicted values, from a nearest shrunken centroid fit.
A function giving a table of true versus predicted values, from a nearest shrunken centroid fit.
pamr.confusion(fit, threshold, extra=TRUE)
fit |
The result of a call to pamr.train or pamr.cv |
threshold |
The desired threshold value |
extra |
Should the classwise and overall error rates be returned? Default TRUE |
pamr.confusion Gives a cross-tabulation of true versus
predicted classes for the fit returned by pamr.train or pamr.cv,
at the specified threshold.
Trevor Hastie, Robert Tibshirani, Balasubramanian Narasimhan, and Gilbert Chu
suppressWarnings(RNGversion("3.5.0"))
set.seed(120)
x <- matrix(rnorm(1000*20),ncol=20)
y <- sample(c(1:4),size=20,replace=TRUE)
mydata <- list(x=x,y=y)
mytrain <- pamr.train(mydata)
mycv <- pamr.cv(mytrain,mydata)
pamr.confusion(mytrain, threshold=2)
pamr.confusion(mycv, threshold=2)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.