pamr: pamr.confusion.survival – R documentation

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pamr.confusion.survival

Compute confusin matrix from pamr survival fit

Description

computes confusion matrix for (survival.time,censoring) outcome based on fit object "fit" and class predictions "yhat" soft response probabilities for (survival.time,censoring) are first estimated using Kaplan-Meier method applied to training data

Usage

pamr.confusion.survival(fit, survival.time, censoring.status, yhat)

Arguments

`fit`	The result of a call to pamr.train or pamr.cv
`survival.time`	Survival time
`censoring.status`	censoring status
`yhat`	class predictions

Author(s)

Trevor Hastie, Robert Tibshirani, Balasubramanian Narasimhan, and Gilbert Chu

pamr

Pam: Prediction Analysis for Microarrays

v1.56.1

GPL-2

Authors

T. Hastie, R. Tibshirani, Balasubramanian Narasimhan, Gil Chu

Initial release