A function to plot the FDR curve from the nearest shrunken centroid classifier
A function to plot the FDR curve the nearest shrunken centroid classifier
pamr.plotfdr(fdrfit, call.win.metafile = FALSE)
fdrfit |
The result of a call to pamr.fdr |
call.win.metafile |
Used by Excel interface |
pamr.plotfdr plots the FDR
curves from nearest shrunken
centroid classifier. The median FDR (solid line) and upper 90 percentile
(broken line) are shown
Trevor Hastie,Robert Tibshirani, Balasubramanian Narasimhan, and Gilbert Chu
suppressWarnings(RNGversion("3.5.0"))
set.seed(120)
x <- matrix(rnorm(1000*20),ncol=20)
y <- sample(c(1:2),size=20,replace=TRUE)
x[1:50,y==2]=x[1:50,y==2]+3
mydata <- list(x=x,y=y)
mytrain <- pamr.train(mydata)
myfdr <- pamr.fdr(mytrain, mydata)
pamr.plotfdr(myfdr)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.