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R
phyloseq

import_mothur_shared

Import mothur shared file and return an otu_table

Description

Import mothur shared file and return an otu_table

Usage

import_mothur_shared(mothur_shared_file, cutoff = NULL)

Arguments

mothur_shared_file

(Required). A shared file produced by mothur.

Value

An otu_table object.

See Also

phyloseq

Handling and analysis of high-throughput microbiome census data

v1.34.0
AGPL-3
Authors
Paul J. McMurdie <joey711@gmail.com>, Susan Holmes <susan@stat.stanford.edu>, with contributions from Gregory Jordan and Scott Chamberlain
Initial release
2019-04-23

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