Internal: compares two pairs of alleles
Used for computation of the genetic distances alleledist
.
allelepaircomp(allelepair1,allelepair2,method="sum")
allelepair1 |
vector of two allele codes (usually characters), or
|
allelepair2 |
vector of two allele codes (usually characters), or
|
method |
one of |
If method=="sum"
, number of shared alleles (0, 1 or 2), or
NA
. If method=="geometrical"
, 0, 0.5, sqrt(0.5)
(in case that one of the allelepairs is double such as in
c("A","B"),c("A","A")
) or 1, or
NA
.
allelepaircomp(c("A","B"),c("A","C"))
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