prabclus: geo2neighbor – R documentation

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geo2neighbor

Neighborhood list from geographical distance

Generates a neighborhood list as required by prabinit from a matrix of geographical distances.

geo2neighbor(geodist,cut=0.1*max(geodist))

`geodist`	`dist`-object or symmetric non-negative matrix. Geographical distances between regions.
`cut`	non-negative numerical. All pairs of regions with `distance<=cut` are treated as neighbors.

A list of integer vectors, giving the set of neighbors for every region.

data(waterdist)
geo2neighbor(waterdist)

Functions for Clustering and Testing of Presence-Absence, Abundance and Multilocus Genetic Data

v2.3-2

GPL

Authors

Christian Hennig <christian.hennig@unibo.it>, Bernhard Hausdorf <Hausdorf@zoologie.uni-hamburg.de>

Initial release

2020-01-06