rotl: taxon_external_IDs – R documentation

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taxon_external_IDs

Get external identifiers for data associated with an Open Tree taxon

Description

The Open Tree taxonomy is a synthesis of multiple reference taxonomies. This function retrieves identifiers to external taxonomic records that have contributed the rank, position and definition of a given Open Tree taxon.

Usage

taxon_external_IDs(taxon_id)

Arguments

taxon_id

An open tree study ID

Value

a data.frame in which each row represents a unique record in an external database. The column "source" provides and abbreviated name for the database, and "id" the unique ID for the record.

Examples

## Not run: 
   gibbon_IDs <- taxon_external_IDs(712902)

## End(Not run)

rotl

Interface to the 'Open Tree of Life' API

v3.0.11

BSD_2_clause + file LICENSE

Authors

Francois Michonneau [aut, cre] (<https://orcid.org/0000-0002-9092-966X>), Joseph Brown [aut] (<https://orcid.org/0000-0002-3835-8062>), David Winter [aut] (<https://orcid.org/0000-0002-6165-0029>), Scott Chamberlain [rev] (<https://orcid.org/0000-0003-1444-9135>)

Initial release