sfsmisc: pkgLibs – R documentation

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pkgLibs

R Package Compiled Code Library Dependencies (on Unix-alikes)

Description

List some system level information about the compiled code library, typically its dependencies, for R packages with compiled code; for Unix-alikes or more generally when cmd is installed locally.

Usage

pkgLibs(pkg,
        cmd = if(Sys.info()[["sysname"]] == "Darwin") "otool -L" else "ldd")

Arguments

pkg

character vector of package names of installed R packages.

cmd

a character string with the name of an OS / system level program (to be called via system(cmd, ..)) which gives information about the shared library (of compiled code), also known as “DLL” (dynamically loadable library) or “so” ((dynamic) shared object) library. The default, "ldd" is a standard binary utility on Unix-alike platforms such as Linux. On macOS, "oTool -L" is used by default.

Details

Note that there seems some language confusion as “DLL” on Windows is also used for “Dynamic-link Library” and Wikipedia warns about confusing the two concepts (“dynamically loaded ..” vs “dynamic-link ..”).

Value

a named list with one entry per package in pkg, the names being the directory / folder names of the corresponding pkgs from pkg.

The exact structure of such entries is currently subject to change and you should not rely on its exact format for now.

Author(s)

Martin Maechler

References

‘Dynamic Loading’ on Wikipedia, https://en.wikipedia.org/wiki/Dynamic_loading

On Windows, “DLL” is also used for Dynamic-link library, https://en.wikipedia.org/wiki/Dynamic-link_library.

man ldd from a terminal on a valid OS.

Examples

# for the example only using standard R packages :
myPkgs <- c("stats", "MASS", "rpart", "Matrix")
pl <- pkgLibs(myPkgs)
pl
stopifnot(exprs = {
  is.list(pl)
  length(pl) == length(myPkgs)
  is.character(pkgD <- names(pl))
})
## Have seen this failing when a strange development version of "Matrix" was picked up:
try( stopifnot( dir.exists(pkgD)) )

sfsmisc

Utilities from 'Seminar fuer Statistik' ETH Zurich

v1.1-11

GPL (>= 2)

Authors

Martin Maechler [aut, cre] (<https://orcid.org/0000-0002-8685-9910>), Werner Stahel [ctb] (Functions: compresid2way(), f.robftest(), last(), p.scales(), p.dnorm()), Andreas Ruckstuhl [ctb] (Functions: p.arrows(), p.profileTraces(), p.res.2x()), Christian Keller [ctb] (Functions: histBxp(), p.tachoPlot()), Kjetil Halvorsen [ctb] (Functions: KSd(), ecdf.ksCI()), Alain Hauser [ctb] (Functions: cairoSwd(), is.whole(), toLatex.numeric()*), Christoph Buser [ctb] (to function Duplicated()), Lorenz Gygax [ctb] (to function p.res.2fact()), Bill Venables [ctb] (Functions: empty.dimnames(), primes()), Tony Plate [ctb] (to inv.seq()), Isabelle Fl<fc>ckiger [ctb], Marcel Wolbers [ctb], Markus Keller [ctb], Sandrine Dudoit [ctb], Jane Fridlyand [ctb], Greg Snow [ctb] (to loessDemo()), Henrik Aa. Nielsen [ctb] (to loessDemo()), Vincent Carey [ctb], Ben Bolker [ctb], Philippe Grosjean [ctb], Fr<e9>d<e9>ric Ibanez [ctb], Caterina Savi [ctb], Charles Geyer [ctb], Jens Oehlschl<e4>gel [ctb]

Initial release

2021-04-03