sp: SpatialGridDataFrame-class – R documentation

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SpatialGridDataFrame-class

Class "SpatialGridDataFrame"

Description

Class for spatial attributes that have spatial locations on a (full) regular grid.

Objects from the Class

Objects can be created by calls of the form as(x, "SpatialGridDataFrame"), where x is of class SpatialPixelsDataFrame-class, or by importing through rgdal. Ordered full grids are stored instead or unordered non-NA cells;

Slots

grid:: see GridTopology-class; grid parameters
bbox:: Object of class "matrix"; bounding box
proj4string:: Object of class "CRS"; projection
data:: Object of class data.frame, containing attribute data

Extends

Class "SpatialGrid", directly. Class "Spatial", by class "SpatialGrid".

Methods

coordinates: signature(x = "SpatialGridDataFrame"): retrieves (and calculates!) coordinates
[: signature(x = "SpatialGridDataFrame"): selects rows, columns, and attributes; returns an object of class SpatialGridDataFrame
as.matrix: signature(x = "SpatialGridDataFrame"): coerce to matrix; increasing col index corresponds to decreasing y coordinate, row index increases with coordinate index
as.array: signature(x = "SpatialGridDataFrame"): coerce to array; increasing array index for the second dimension corresponds to decreasing coordinates, all other coordinate dimensions increase with array index
cbind: signature(...): if arguments have identical topology, combine their attribute values

Plot method arguments

The plot methods for “SpatialPixelsDataFrame” or “SpatialGridDataFrame” objects take the following arguments:

x: object of class SpatialPixelsDataFrame or SpatialGridDataFrame
...: arguments passed on to image.SpatialGridDataFrame
attr: integer or character, indicating the attribute variable to be plotted; default 1
col: color ramp to be used; default bpy.colors(100) for continuous, or RColorBrewer::brewer.pal(nlevels(x[[1]]), "Set2") for factor variables
breaks: for continuous attributes: values at which color breaks should take place
zlim: for continuous attributes: numeric of length 2, specifying the range of attribute values to be plotted; default to data range range(as.numeric(x[[attr]])[is.finite(x[[attr]])])
axes: logical: draw x and y axes? default FALSE
xaxs: character, default "i", see par
yaxs: character, default equal to xaxs, see par
at: numeric or NULL, values at which axis tics and labels should be drawn; default NULL (use pretty)
border: color, to be used for drawing grid lines; default NA (don't draw grid lines)
axis.pos: integer, 1-4; default 4, see axis
add.axis: logical: draw axis along scale? default TRUE
what: what to draw: "image", "scale", or "both"; default "both"
scale.size: size for the scale bar; use lcm to specify in absolute size, or a numeric value such as 1/6 to specify relative size; default lcm(2.8)
scale.shrink: non-negative numeric indicating the amount to shrink the scale length, default 0
scale.frac: for categorical attributes: numeric between 0 and 1, indicating the scale width, default 0.3
scale.n: for categorical attributes: integer, indicating how many scale categories should fill a complete width; default 15

Author(s)

Edzer Pebesma, edzer.pebesma@uni-muenster.de

Examples

data(meuse.grid) # only the non-missing valued cells
coordinates(meuse.grid) = c("x", "y") # promote to SpatialPointsDataFrame
gridded(meuse.grid) <- TRUE # promote to SpatialPixelsDataFrame
x = as(meuse.grid, "SpatialGridDataFrame") # creates the full grid
x[["idist"]] = 1 - x[["dist"]] # assigns new attribute
image(x["idist"]) # note the single [ for attribute selection

# toy example:
df = data.frame(z = c(1:6,NA,8,9),
    xc = c(1,1,1,2,2,2,3,3,3),
    yc = c(rep(c(0, 1.5, 3),3)))
coordinates(df) = ~xc+yc
gridded(df) = TRUE
df = as(df, "SpatialGridDataFrame") # to full grid
image(df["z"])
# draw labels to verify:
cc = coordinates(df)
z=df[["z"]]
zc=as.character(z)
zc[is.na(zc)]="NA"
text(cc[,1],cc[,2],zc)

# the following is weird, but illustrates the concept of row/col selection:
fullgrid(meuse.grid) = TRUE
image(meuse.grid)
image(meuse.grid[20:70, 10:70, "dist"], add = TRUE, col = bpy.colors())

# as.matrix, as.array
sgdim = c(3,4)
SG = SpatialGrid(GridTopology(rep(0,2), rep(10,2), sgdim))
SGDF = SpatialGridDataFrame(SG, data.frame(val = 1:12))
as.array(SGDF)
as.matrix(SGDF)
as(SGDF, "array")

sp

Classes and Methods for Spatial Data

v1.4-5

GPL (>= 2)

Authors

Edzer Pebesma [aut, cre], Roger Bivand [aut], Barry Rowlingson [ctb], Virgilio Gomez-Rubio [ctb], Robert Hijmans [ctb], Michael Sumner [ctb], Don MacQueen [ctb], Jim Lemon [ctb], Finn Lindgren [ctb], Josh O'Brien [ctb], Joseph O'Rourke [ctb]

Initial release