AnnotationDbi: make_eg_to_go_map – R documentation

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make_eg_to_go_map

Create GO to Entrez Gene maps for chip-based packages

Create a new map object mapping Entrez ID to GO (or vice versa) given a chip annotation data package.

This is a temporary solution until a more general pluggable map solution comes online.

make_eg_to_go_map(chip)

chip

The name of the annotation data package.

Either a Go3AnnDbMap or a RevGo3AnnDbMap.

Seth Falcon and Hervé Pagès

library("hgu95av2.db")

eg2go = make_eg_to_go_map("hgu95av2.db")
sample(eg2go, 2)

go2eg = make_go_to_eg_map("hgu95av2.db")
sample(go2eg, 2)

Manipulation of SQLite-based annotations in Bioconductor

v1.52.0

Artistic-2.0

Authors

Hervé Pagès, Marc Carlson, Seth Falcon, Nianhua Li

Initial release