AnnotationDbi

AnnDbObj objects

Check the SQL data contained in an SQLite-based annotation package

AnnotationDb objects and their progeny, methods etc.

AnnotationDbi internals

Bimap objects and the Bimap interface

Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys

Environment-like API for Bimap objects

Methods for manipulating the keys of a Bimap object

Methods for manipulating a Bimap object in a data-frame style

Methods for getting/setting the filters on a Bimap object

Formatting a Bimap as a list or character vector

Descriptions of available values for columns and keytypes for GO.db.

GOFrame and GOAllFrame objects

Class "GOTerms"

Descriptions of available values for columns and keytypes for inparanpoid packages.

KEGGFrame objects

Descriptions of available values for columns and keytypes.

Creates a simple Bimap from a SQLite database in an situation that is external to AnnotationDbi

Convenience functions for mapping IDs through an appropriate set of annotation packages

A convenience function to generate graphs based on the GO.db package

Create GO to Entrez Gene maps for chip-based packages

Org package contained in annotation object

Print method for probetable objects

Convert a vector to a quoted string for use as a SQL value list

A replacement for unlist() that does not mangle the names