Become an expert in R — Interactive courses, Cheat Sheets, certificates and more!

Get Started for Free

BaseSet

Working with Sets the Tidy Way

Implements a class and methods to work with sets, doing intersection, union, complementary sets, power sets, cartesian product and other set operations in a "tidy" way. These set operations are available for both classical sets and fuzzy sets. Import sets from several formats or from other several data structures.

Functions (67)

BaseSet-package

BaseSet: Working with Sets the Tidy Way

TidySet-class

A tidy class to represent a set

Determine the context of subsequent manipulations.

Add column

add_elements

Add elements to a TidySet

add_relation

Add relations

add_relations

Add relations to a TidySet

Add sets to a TidySet

Adjacency

Arrange the order of a TidySet

as.data.frame.TidySet

Transforms a TidySet to a data.frame

as.list.TidySet

Convert to list

cardinality

Cardinality or membership of sets

Create the cartesian product of two sets

Complement TidySet

complement_element

Complement of elements

complement_set

Complement of a set

The opposite of as.data.frame

droplevels.TidySet

Drop unused elements and sets

element_size

Calculates the size of the elements

Elements of the TidySet

Apply to fuzzy

Filter TidySet

Read a GAF file

Import GMT (Gene Matrix Transposed) files

Read an OBO file

Create a new set from existing elements

group_by TidySet

Incidence

independent

Independence of the sets

intersection

Intersection of two or more sets

Check if a TidySet is fuzzy.

Are some sets as elements of other sets?

length_probability

Calculates the probability of a single length

Calculates the probability

Move columns between slots

multiply_probabilities

Probability of a vector of probabilities

Mutate

Number of elements

Number of relations

Number of sets

name_elements

Name elements

name_elements-set

Rename elements

Name sets

name_sets-set

Rename sets

Name an operation

pipe

Pipe operator

Create the power set

Pull from a TidySet

Objects exported from other packages

Relations of the TidySet

remove_column

Remove column

remove_element

Remove elements

remove_relation

Remove a relation

Remove sets

rename_elements

Rename elements

Rename sets

select from a TidySet

Calculates the size of a set

set_symbols

A subset of symbols related to sets

sets

Sets of the TidySet

show-TidySet-method

Method to show the TidySet object

size

Size

Subtract

tidy

Convert GSEABase classes to a TidySet

Create a TidySet object

Join sets

BaseSet

Working with Sets the Tidy Way

v0.0.16

MIT + file LICENSE

Authors

Lluís Revilla Sancho [aut, cre] (<https://orcid.org/0000-0001-9747-2570>), Zebulun Arendsee [rev], Jennifer Chang [rev]

Initial release

We don't support your browser anymore

Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.