Add user function to RxODE
This adds a user function to RxODE that can be called. If needed,
these functions can be differentiated by numerical differences or
by adding the derivatives to RxODE's internal derivative table
with rxD()
rxFun(name, args, cCode) rxRmFun(name)
name |
This gives the name of the user function |
args |
This gives the arguments of the user function |
cCode |
This is the C-code for the new function |
nothing
Matthew L. Fidler
## Right now RxODE is not aware of the function f ## Therefore it cannot translate it to symengine or ## Compile a model with it. try(RxODE("a=fun(a,b,c)")) ## Note for this approach to work, it cannot interfere with C ## function names or reserved RxODE specical terms. Therefore ## f(x) would not work since f is an alias for bioaviability. fun <- " double fun(double a, double b, double c) { return a*a+b*a+c; } " ## C-code for function rxFun("fun",c("a","b","c"), fun) ## Added function ## Now RxODE knows how to translate this function to symengine rxToSE("fun(a,b,c)") ## And will take a central difference when calculating derivatives rxFromSE("Derivative(fun(a,b,c),a)") ## Of course, you could specify the derivative table manually rxD("fun", list(function(a,b,c){ paste0("2*",a,"+",b); }, function(a,b,c){ return(a) }, function(a,b,c){ return("0.0") } )) rxFromSE("Derivative(fun(a,b,c),a)") # You can also remove the functions by `rxRmFun` rxRmFun("fun")
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