clusterProfiler: buildGOmap – R documentation

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buildGOmap

Description

building GO mapping files

Usage

buildGOmap(gomap)

Arguments

gomap

data.frame with two columns of GO and gene ID

Details

provided by a data.frame of GO (column 1) and gene (column 2) direct annotation this function will building gene to GO and GO to gene mapping, with directly and undirectly (ancestor GO term) annotation.

Value

data.frame, GO annotation with indirect annotation

Author(s)

Yu Guangchuang

clusterProfiler

statistical analysis and visualization of functional profiles for genes and gene clusters

v3.18.1

Artistic-2.0

Authors

Guangchuang Yu [aut, cre, cph] (<https://orcid.org/0000-0002-6485-8781>), Li-Gen Wang [ctb], Giovanni Dall'Olio [ctb] (formula interface of compareCluster)

Initial release