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plotGOgraph

plotGOgraph

Description

plot GO graph

Usage

plotGOgraph(
  x,
  firstSigNodes = 10,
  useInfo = "all",
  sigForAll = TRUE,
  useFullNames = TRUE,
  ...
)

Arguments

x

output of enrichGO or gseGO
firstSigNodes

number of significant nodes (retangle nodes in the graph)
useInfo

additional info
sigForAll

if TRUE the score/p-value of all nodes in the DAG is shown, otherwise only score will be shown
useFullNames

logical
...

additional parameter of showSigOfNodes, please refer to topGO

Value

GO DAG graph

Author(s)

Guangchuang Yu

clusterProfiler

statistical analysis and visualization of functional profiles for genes and gene clusters

v3.18.1
Artistic-2.0
Authors
Guangchuang Yu [aut, cre, cph] (<https://orcid.org/0000-0002-6485-8781>), Li-Gen Wang [ctb], Giovanni Dall'Olio [ctb] (formula interface of compareCluster)
Initial release

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