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flip_leaves

Flip leaves

Description

Rotate a branch in a tree so that the locations of two bundles of leaves are flipped.

Usage

flip_leaves(dend, leaves1, leaves2, ...)

Arguments

dend

a dendrogram object
leaves1

a vector of leaves order value to flip.
leaves2

a (second) vector of leaves order value to flip.
...

not used

Details

This function is based on a bunch of string manipulation functions. There may be a smarter/better way for doing it...

Value

A dendrogram object with flipped leaves.

See Also

Examples

## Not run: 
dend1 <- USArrests[1:5, ] %>%
  dist() %>%
  hclust() %>%
  as.dendrogram()
dend2 <- flip_leaves(dend1, c(3, 5), c(1, 2))
tanglegram(dend1, dend2)
entanglement(dend1, dend2, L = 2) # 0.4

## End(Not run)
dendextend

Extending 'dendrogram' Functionality in R

v1.15.1
GPL-2 | GPL-3
Authors
Tal Galili [aut, cre, cph] (https://www.r-statistics.com), Yoav Benjamini [ths], Gavin Simpson [ctb], Gregory Jefferis [aut, ctb] (imported code from his dendroextras package), Marco Gallotta [ctb] (a.k.a: marcog), Johan Renaudie [ctb] (https://github.com/plannapus), The R Core Team [ctb] (Thanks for the Infastructure, and code in the examples), Kurt Hornik [ctb], Uwe Ligges [ctb], Andrej-Nikolai Spiess [ctb], Steve Horvath [ctb], Peter Langfelder [ctb], skullkey [ctb], Mark Van Der Loo [ctb] (https://github.com/markvanderloo d3dendrogram), Andrie de Vries [ctb] (ggdendro author), Zuguang Gu [ctb] (circlize author), Cath [ctb] (https://github.com/CathG), John Ma [ctb] (https://github.com/JohnMCMa), Krzysiek G [ctb] (https://github.com/storaged), Manuela Hummel [ctb] (https://github.com/hummelma), Chase Clark [ctb] (https://github.com/chasemc), Lucas Graybuck [ctb] (https://github.com/hypercompetent), jdetribol [ctb] (https://github.com/jdetribol), Ben Ho [ctb] (https://github.com/SplitInf), Samuel Perreault [ctb] (https://github.com/samperochkin), Christian Hennig [ctb] (http://www.homepages.ucl.ac.uk/~ucakche/), David Bradley [ctb] (https://github.com/DBradley27), Houyun Huang [ctb] (https://github.com/houyunhuang)
Initial release
2021-05-08

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