hierfstat: boot.ppbetas – R documentation

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boot.ppbetas

Estimates bootstrap confidence intervals for pairwise betas FST estimates

Estimates bootstrap confidence intervals for pairwise betas FST estimates.

boot.ppbetas(dat=dat,nboot=100,quant=c(0.025,0.975),diploid=TRUE,digits=4)

`dat`	A data frame containing population of origin as the first column and multi-locus genotypes in following columns
`nboot`	the number of bootstrap samples to draw
`quant`	the limit of the confidence intervals
`diploid`	whether the data is from a diploid (default) or haploid organism
`digits`	how many digits to print out

a matrix with upper limit of the bootstrap CI above the diagonal and lower limit below the diagonal

## Not run: 
data(gtrunchier)
boot.ppbetas(gtrunchier[,-2])

## End(Not run)

Estimation and Tests of Hierarchical F-Statistics

v0.5-10

GPL (>= 2)

Authors

Jerome Goudet [aut, cre], Thibaut Jombart [aut], Zhian N. Kamvar [ctb], Eric Archer [ctb], Olivier Hardy [ctb]

Initial release

2021-11-16