Hare: hazard regression
Fit a hazard regression model: linear splines are used to model the baseline hazard, covariates, and interactions. Fitted models can be, but do not need to be, proportional hazards models.
hare(data, delta, cov, penalty, maxdim, exclude, include, prophaz = FALSE, additive = FALSE, linear, fit, silent = TRUE)
data |
vector of observations. Observations may or may not be right censored. All observations should be nonnegative. |
delta |
binary vector with the same length as |
cov |
covariates: matrix with as many rows as the length of |
penalty |
the parameter to be used in the AIC criterion. The method chooses
the number of knots that minimizes |
maxdim |
maximum dimension (default is \code{6 * length(data)^0.2}. |
exclude |
combinations to be excluded - this should be a matrix with 2
columns - if for example |
include |
those combinations that can be included. Should have the same format
as |
prophaz |
should the model selection be restricted to proportional hazards models? |
additive |
should the model selection be restricted to additive models? |
linear |
vector indicating for which of the variables no knots should
be entered. For example, if |
fit |
|
silent |
suppresses the printing of diagnostic output about basis functions added or deleted, Rao-statistics, Wald-statistics and log-likelihoods. |
ncov |
number of covariates. |
ndim |
number of dimensions of the fitted model. |
fcts |
matrix of size second element: which knot (0 means: constant (time) or linear (covariate)); third element: second covariate involved ( fourth element: knot involved (if the third element is fifth element: beta; sixth element: standard error of beta. |
knots |
a matrix with |
penalty |
the parameter used in the AIC criterion. |
max |
maximum element of survival data. |
ranges |
column |
logl |
matrix with two columns. The |
sample |
sample size. |
Charles Kooperberg clk@fredhutch.org.
Charles Kooperberg, Charles J. Stone and Young K. Truong (1995). Hazard regression. Journal of the American Statistical Association, 90, 78-94.
Charles J. Stone, Mark Hansen, Charles Kooperberg, and Young K. Truong. The use of polynomial splines and their tensor products in extended linear modeling (with discussion) (1997). Annals of Statistics, 25, 1371–1470.
fit <- hare(testhare[,1], testhare[,2], testhare[,3:8])
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