Taxonomic IDs to taxonomic names
Taxonomic IDs to taxonomic names
id2name(id, db = NULL, x = NULL, ...) ## Default S3 method: id2name(id, db = NULL, x = NULL, ...) ## S3 method for class 'tolid' id2name(id, ...) ## S3 method for class 'tsn' id2name(id, ...) ## S3 method for class 'uid' id2name(id, ...) ## S3 method for class 'wormsid' id2name(id, ...) ## S3 method for class 'gbifid' id2name(id, ...) ## S3 method for class 'boldid' id2name(id, ...)
id |
vector of taxonomic IDs (character or numeric) |
db |
(character) database to query. One or more of |
x |
Deprecated, see |
... |
Further args passed on to |
A named list of data.frames, named by the input taxonomic ids
We hard code http_version = 2L to use HTTP/1.1 in HTTP requests to
the Entrez API. See curl::curl_symbols('CURL_HTTP_VERSION')
## Not run: # ITIS id2name(19322, db = "itis") # TOL id2name(515698, db = "tol") # get NCBI ID and pass to classification() x <- id2name(515698, db = "tol") classification(as.uid(x[[1]]$tax_sources_ncbi)) # NCBI id2name(315567, db = "ncbi") id2name(3339, db = "ncbi") id2name(9696, db = "ncbi") id2name(c(9695, 9696), db = "ncbi") # WORMS id2name(105706, db = "worms") # GBIF id2name(2441176, db = "gbif") # BOLD id2name(88899, db = "bold") ## End(Not run)
Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.