Get a summary from the IUCN Red List
Get a summary from the IUCN Red List (https://www.iucnredlist.org/).
iucn_summary(x, distr_detail = FALSE, key = NULL, ...)
x |
character; Scientific name. Should be cleaned and in the
format |
distr_detail |
logical; If |
key |
a Redlist API key, get one from
https://apiv3.iucnredlist.org/api/v3/token Required for
|
... |
curl options passed on to crul::verb-GET |
Beware: IUCN functions can give back incorrect data. This isn't our fault. We do our best to get you the correct data quickly, but sometimes IUCN gives back the wrong data, and sometimes Global Names gives back the wrong data. We will fix these as soon as possible. In the meantime, just make sure that the data you get back is correct.
iucn_summary has a default method that errors when anything's
passed in that's not character or iucn class - a
iucn_summary.character method for when you pass in taxon names -
and a iucn_summary.iucn method so you can pass in iucn class objects
as output from get_iucn() or as.iucn(). If you
already have IUCN IDs, coerce them to iucn class via
as.iucn(..., check = FALSE)
A list (for every species one entry) of lists with the following items:
status Red List Category.
history History of status, if available.
distr Geographic distribution, if available.
trend Trend of population size, if available.
iucn_summary uses the new Redlist API for searching for a IUCN ID, so we
use the rl_search() function internally. This function
requires an API key. Get the key at https://apiv3.iucnredlist.org/api/v3/token,
and pass it to the key parameter, or store in your .Renviron file like
IUCN_REDLIST_KEY=yourkey or in your .Rprofile file like
options(iucn_redlist_key="yourkey"). We strongly encourage you to not pass
the key in the function call but rather store it in one of those two files.
This key will also set you up to use the rredlist package.
Not all entries (history, distr, trend) are available for every species
and NA is returned.
iucn_status() is an extractor function to easily extract
status into a vector.
Eduard Szoecs, eduardszoecs@gmail.com
Philippe Marchand, marchand.philippe@gmail.com
Scott Chamberlain,
## Not run:
# if you send a taxon name, an IUCN API key is required
## here, the key is being detected from a .Rprofile file
## or .Renviron file, See "Redlist Authentication" above
iucn_summary("Lutra lutra")
ia <- iucn_summary(c("Panthera uncia", "Lynx lynx"))
ia <- iucn_summary(c("Panthera uncia", "Lynx lynx", "aaa"))
iucn_summary("Muntiacus rooseveltorum/truongsonensis")
iucn_summary(c("Muntiacus rooseveltorum/truongsonensis", "Lynx lynx"))
## get detailed distribution
iac <- iucn_summary(x="Ara chloropterus", distr_detail = TRUE)
iac[[1]]$distr
# If you pass in an IUCN ID, you don't need to pass in a Redlist API Key
# extract status
iucn_status(iac)
## End(Not run)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.